Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX2-1P43699 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NKX2-1P43699 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX2-1P43699 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX2-1P43699 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX2-1P43699 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 MIR4651-201ENST00000582622 73 ntBASIC14.4□□□□□ -0.1
NKX2-1P43699 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NKX2-1P43699 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-1P43699 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX2-1P43699 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-1P43699 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
NKX2-1P43699 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
NKX2-1P43699 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 WWOX-216ENST00000569818 525 ntBASIC14.39□□□□□ -0.11
NKX2-1P43699 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.39□□□□□ -0.11
NKX2-1P43699 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NKX2-1P43699 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX2-1P43699 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NKX2-1P43699 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX2-1P43699 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NKX2-1P43699 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NKX2-1P43699 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NKX2-1P43699 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NKX2-1P43699 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-1P43699 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-1P43699 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms