Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGCLP35914 AC046185.3-201ENST00000623228 1824 ntBASIC17.47■□□□□ 0.39
HMGCLP35914 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HMGCLP35914 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGCLP35914 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCLP35914 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCLP35914 SPDYE21P-201ENST00000413323 827 ntBASIC17.46■□□□□ 0.39
HMGCLP35914 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCLP35914 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCLP35914 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCLP35914 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCLP35914 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCLP35914 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCLP35914 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HMGCLP35914 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCLP35914 AC079776.2-201ENST00000641154 1609 ntBASIC17.46■□□□□ 0.39
HMGCLP35914 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCLP35914 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCLP35914 AC016396.2-201ENST00000562575 1417 ntBASIC17.46■□□□□ 0.39
HMGCLP35914 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMGCLP35914 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCLP35914 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMGCLP35914 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCLP35914 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCLP35914 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
HMGCLP35914 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HMGCLP35914 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGCLP35914 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCLP35914 AL020989.1-201ENST00000422979 469 ntBASIC17.45■□□□□ 0.38
HMGCLP35914 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGCLP35914 SAPCD2P3-201ENST00000455031 850 ntBASIC17.45■□□□□ 0.38
HMGCLP35914 UNC93B7-201ENST00000509439 705 ntBASIC17.45■□□□□ 0.38
HMGCLP35914 AL355877.3-201ENST00000622820 899 ntBASIC17.45■□□□□ 0.38
HMGCLP35914 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCLP35914 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCLP35914 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCLP35914 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HMGCLP35914 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HMGCLP35914 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 AKR1C7P-201ENST00000305623 895 ntBASIC17.44■□□□□ 0.38
HMGCLP35914 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 AL450487.1-201ENST00000426799 995 ntBASIC17.44■□□□□ 0.38
HMGCLP35914 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.44■□□□□ 0.38
HMGCLP35914 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCLP35914 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HMGCLP35914 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HMGCLP35914 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms