Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SOX11P35716 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SOX11P35716 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SOX11P35716 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SOX11P35716 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 AC079328.2-201ENST00000561241 3354 ntBASIC17.2■□□□□ 0.34
SOX11P35716 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 SIRPAP1-201ENST00000448467 1770 ntBASIC17.2■□□□□ 0.34
SOX11P35716 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 KRT18P23-201ENST00000435622 1283 ntBASIC17.2■□□□□ 0.34
SOX11P35716 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.2■□□□□ 0.34
SOX11P35716 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.2■□□□□ 0.34
SOX11P35716 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX11P35716 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX11P35716 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SOX11P35716 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SOX11P35716 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX11P35716 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX11P35716 AC124067.4-201ENST00000519691 2379 ntBASIC17.2■□□□□ 0.34
SOX11P35716 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SOX11P35716 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX11P35716 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.19■□□□□ 0.34
SOX11P35716 AP000593.1-201ENST00000393668 712 ntBASIC17.19■□□□□ 0.34
SOX11P35716 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX11P35716 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 AC104390.1-201ENST00000555663 520 ntBASIC17.19■□□□□ 0.34
SOX11P35716 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 NPAP1P7-201ENST00000613027 823 ntBASIC17.19■□□□□ 0.34
SOX11P35716 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SOX11P35716 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX11P35716 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX11P35716 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX11P35716 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 AL355312.1-201ENST00000407115 2176 ntBASIC17.18■□□□□ 0.34
SOX11P35716 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX11P35716 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX11P35716 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms