Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
CHMP24386 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 AC100803.2-201ENST00000562459 1963 ntBASIC16.44■□□□□ 0.22
CHMP24386 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHMP24386 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP24386 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.44■□□□□ 0.22
CHMP24386 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP24386 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.44■□□□□ 0.22
CHMP24386 DUTP2-201ENST00000519164 463 ntBASIC16.44■□□□□ 0.22
CHMP24386 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.44■□□□□ 0.22
CHMP24386 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHMP24386 AC090616.6-201ENST00000582640 721 ntBASIC16.44■□□□□ 0.22
CHMP24386 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.44■□□□□ 0.22
CHMP24386 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP24386 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CHMP24386 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP24386 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP24386 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP24386 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 HCG4P8-203ENST00000443049 980 ntBASIC16.43■□□□□ 0.22
CHMP24386 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHMP24386 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.43■□□□□ 0.22
CHMP24386 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 KRT18P56-201ENST00000507275 550 ntBASIC16.43■□□□□ 0.22
CHMP24386 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP24386 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP24386 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP24386 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP24386 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP24386 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP24386 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP24386 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP24386 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP24386 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 AL353692.3-201ENST00000407031 1396 ntBASIC16.42■□□□□ 0.22
CHMP24386 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHMP24386 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.42■□□□□ 0.22
CHMP24386 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP24386 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.42■□□□□ 0.22
CHMP24386 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CHMP24386 NPAP1P7-201ENST00000613027 823 ntBASIC16.42■□□□□ 0.22
CHMP24386 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms