Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM21P19474 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM21P19474 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM21P19474 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM21P19474 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM21P19474 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM21P19474 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM21P19474 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM21P19474 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
TRIM21P19474 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM21P19474 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM21P19474 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRIM21P19474 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TRIM21P19474 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM21P19474 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM21P19474 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
TRIM21P19474 FAM86EP-206ENST00000510506 987 ntBASIC19.39■□□□□ 0.69
TRIM21P19474 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM21P19474 AC005332.1-201ENST00000577698 1310 ntBASIC19.39■□□□□ 0.69
TRIM21P19474 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRIM21P19474 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM21P19474 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM21P19474 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM21P19474 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRIM21P19474 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRIM21P19474 REXO1L11P-201ENST00000620964 1927 ntBASIC19.39■□□□□ 0.69
TRIM21P19474 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM21P19474 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
TRIM21P19474 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM21P19474 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM21P19474 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM21P19474 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TRIM21P19474 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM21P19474 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM21P19474 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM21P19474 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
TRIM21P19474 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.38■□□□□ 0.69
TRIM21P19474 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM21P19474 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM21P19474 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
TRIM21P19474 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 BX276092.5-203ENST00000456199 560 ntBASIC19.37■□□□□ 0.69
TRIM21P19474 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM21P19474 AC011498.5-201ENST00000592027 486 ntBASIC19.37■□□□□ 0.69
TRIM21P19474 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 AL121672.3-201ENST00000608644 468 ntBASIC19.37■□□□□ 0.69
TRIM21P19474 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.37■□□□□ 0.69
TRIM21P19474 LINC01451-201ENST00000623792 534 ntBASIC19.37■□□□□ 0.69
TRIM21P19474 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM21P19474 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM21P19474 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRIM21P19474 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms