Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL11A2P13942 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 RBPMS2P1-201ENST00000437762 623 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.24■□□□□ 0.99
COL11A2P13942 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.24■□□□□ 0.99
COL11A2P13942 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.24■□□□□ 0.99
COL11A2P13942 LINC02560-201ENST00000596379 459 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A2P13942 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A2P13942 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 AP005018.1-201ENST00000525475 301 ntBASIC21.23■□□□□ 0.99
COL11A2P13942 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A2P13942 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.23■□□□□ 0.99
COL11A2P13942 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A2P13942 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A2P13942 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A2P13942 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A2P13942 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
COL11A2P13942 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL11A2P13942 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.22■□□□□ 0.99
COL11A2P13942 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A2P13942 GAPDHP21-201ENST00000450301 1010 ntBASIC21.22■□□□□ 0.99
COL11A2P13942 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A2P13942 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL11A2P13942 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.22■□□□□ 0.99
COL11A2P13942 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A2P13942 WIZP1-201ENST00000531444 2299 ntBASIC21.22■□□□□ 0.99
COL11A2P13942 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A2P13942 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A2P13942 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.22■□□□□ 0.99
COL11A2P13942 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
COL11A2P13942 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A2P13942 AC069120.2-201ENST00000524091 540 ntBASIC21.21■□□□□ 0.99
COL11A2P13942 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL11A2P13942 AC026150.2-201ENST00000564693 1156 ntBASIC21.21■□□□□ 0.99
COL11A2P13942 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.21■□□□□ 0.99
COL11A2P13942 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A2P13942 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A2P13942 AL671277.1-201ENST00000429656 993 ntBASIC21.21■□□□□ 0.99
COL11A2P13942 BASP1P1-201ENST00000430708 665 ntBASIC21.21■□□□□ 0.99
COL11A2P13942 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.21■□□□□ 0.99
COL11A2P13942 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
COL11A2P13942 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A2P13942 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A2P13942 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A2P13942 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
COL11A2P13942 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A2P13942 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A2P13942 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.2■□□□□ 0.98
COL11A2P13942 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A2P13942 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A2P13942 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.2■□□□□ 0.98
COL11A2P13942 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.2■□□□□ 0.98
COL11A2P13942 REXO1L9P-201ENST00000604264 2108 ntBASIC21.2■□□□□ 0.98
COL11A2P13942 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.2■□□□□ 0.98
COL11A2P13942 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL11A2P13942 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.2■□□□□ 0.98
COL11A2P13942 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COL11A2P13942 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COL11A2P13942 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COL11A2P13942 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.19■□□□□ 0.98
COL11A2P13942 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.19■□□□□ 0.98
COL11A2P13942 AC084121.4-201ENST00000641598 221 ntBASIC21.19■□□□□ 0.98
COL11A2P13942 AF228730.8-201ENST00000642140 221 ntBASIC21.19■□□□□ 0.98
COL11A2P13942 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A2P13942 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A2P13942 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms