Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.76■□□□□ 0.75
COL11A1P12107 AL139400.1-201ENST00000366220 510 ntBASIC19.76■□□□□ 0.75
COL11A1P12107 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 AC023141.5-201ENST00000458585 616 ntBASIC19.76■□□□□ 0.75
COL11A1P12107 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A1P12107 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.76■□□□□ 0.75
COL11A1P12107 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
COL11A1P12107 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL11A1P12107 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.76■□□□□ 0.75
COL11A1P12107 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.76■□□□□ 0.75
COL11A1P12107 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL11A1P12107 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL11A1P12107 SPCS2P1-201ENST00000561636 679 ntBASIC19.76■□□□□ 0.75
COL11A1P12107 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COL11A1P12107 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.76■□□□□ 0.75
COL11A1P12107 AC093512.1-201ENST00000617969 520 ntBASIC19.76■□□□□ 0.75
COL11A1P12107 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL11A1P12107 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.75■□□□□ 0.75
COL11A1P12107 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.75■□□□□ 0.75
COL11A1P12107 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
COL11A1P12107 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.75■□□□□ 0.75
COL11A1P12107 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.75■□□□□ 0.75
COL11A1P12107 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.75■□□□□ 0.75
COL11A1P12107 AC079781.4-201ENST00000641908 219 ntBASIC19.75■□□□□ 0.75
COL11A1P12107 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL11A1P12107 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
COL11A1P12107 AL355312.1-201ENST00000407115 2176 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A1P12107 AC140658.5-201ENST00000438532 169 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 AC109322.1-201ENST00000524499 1264 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.74■□□□□ 0.75
COL11A1P12107 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
COL11A1P12107 AL139327.4-201ENST00000612362 153 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.74■□□□□ 0.75
COL11A1P12107 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL11A1P12107 KRT18P32-201ENST00000424695 1287 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
COL11A1P12107 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL11A1P12107 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.74■□□□□ 0.75
COL11A1P12107 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL11A1P12107 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.74■□□□□ 0.75
COL11A1P12107 SNHG9-202ENST00000564014 471 ntBASIC19.74■□□□□ 0.75
COL11A1P12107 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A1P12107 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL11A1P12107 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL11A1P12107 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.73■□□□□ 0.75
COL11A1P12107 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A1P12107 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A1P12107 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A1P12107 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL11A1P12107 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL11A1P12107 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A1P12107 AC009093.7-201ENST00000623853 1223 ntBASIC19.73■□□□□ 0.75
COL11A1P12107 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A1P12107 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A1P12107 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A1P12107 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms