Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.28■□□□□ 0.2
UBL4AP11441 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBL4AP11441 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 ARMC10P1-201ENST00000313754 855 ntBASIC16.28■□□□□ 0.2
UBL4AP11441 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.28■□□□□ 0.2
UBL4AP11441 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 AC011840.4-201ENST00000578471 627 ntBASIC16.28■□□□□ 0.2
UBL4AP11441 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBL4AP11441 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBL4AP11441 AL445228.2-201ENST00000605589 952 ntBASIC16.28■□□□□ 0.2
UBL4AP11441 AP000550.4-202ENST00000639755 178 ntBASIC16.28■□□□□ 0.2
UBL4AP11441 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 BX276092.7-203ENST00000637198 1536 ntBASIC16.28■□□□□ 0.2
UBL4AP11441 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
UBL4AP11441 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBL4AP11441 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
UBL4AP11441 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
UBL4AP11441 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.27■□□□□ 0.2
UBL4AP11441 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.27■□□□□ 0.2
UBL4AP11441 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 VENTXP7-201ENST00000475503 772 ntBASIC16.27■□□□□ 0.2
UBL4AP11441 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.27■□□□□ 0.2
UBL4AP11441 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.27■□□□□ 0.2
UBL4AP11441 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.27■□□□□ 0.2
UBL4AP11441 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.27■□□□□ 0.2
UBL4AP11441 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBL4AP11441 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBL4AP11441 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.27■□□□□ 0.19
UBL4AP11441 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBL4AP11441 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.27■□□□□ 0.19
UBL4AP11441 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.27■□□□□ 0.19
UBL4AP11441 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBL4AP11441 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBL4AP11441 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
UBL4AP11441 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
UBL4AP11441 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBL4AP11441 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
UBL4AP11441 AC016734.2-201ENST00000624325 1377 ntBASIC16.26■□□□□ 0.19
UBL4AP11441 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBL4AP11441 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.26■□□□□ 0.19
UBL4AP11441 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 TSSC2-201ENST00000450217 709 ntBASIC16.26■□□□□ 0.19
UBL4AP11441 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.26■□□□□ 0.19
UBL4AP11441 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.26■□□□□ 0.19
UBL4AP11441 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.26■□□□□ 0.19
UBL4AP11441 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.26■□□□□ 0.19
UBL4AP11441 AL358472.4-201ENST00000633140 710 ntBASIC16.26■□□□□ 0.19
UBL4AP11441 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 AC133963.1-201ENST00000504166 1679 ntBASIC16.26■□□□□ 0.19
UBL4AP11441 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBL4AP11441 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.26■□□□□ 0.19
UBL4AP11441 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms