Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KRT18P67-201ENST00000432816 1264 ntBASIC20.63■□□□□ 0.89
TOP1P11387 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
TOP1P11387 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.63■□□□□ 0.89
TOP1P11387 SART3-203ENST00000546611 1184 ntBASIC20.63■□□□□ 0.89
TOP1P11387 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TOP1P11387 AC064862.7-201ENST00000604520 867 ntBASIC20.63■□□□□ 0.89
TOP1P11387 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TOP1P11387 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TOP1P11387 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP1P11387 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP1P11387 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP1P11387 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP1P11387 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.62■□□□□ 0.89
TOP1P11387 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
TOP1P11387 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.62■□□□□ 0.89
TOP1P11387 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.62■□□□□ 0.89
TOP1P11387 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.62■□□□□ 0.89
TOP1P11387 AL139288.1-201ENST00000623748 933 ntBASIC20.62■□□□□ 0.89
TOP1P11387 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP1P11387 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP1P11387 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TOP1P11387 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP1P11387 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP1P11387 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP1P11387 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.61■□□□□ 0.89
TOP1P11387 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 AF186996.4-201ENST00000467186 377 ntBASIC20.61■□□□□ 0.89
TOP1P11387 RNPS1P1-201ENST00000507437 918 ntBASIC20.61■□□□□ 0.89
TOP1P11387 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.61■□□□□ 0.89
TOP1P11387 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.61■□□□□ 0.89
TOP1P11387 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 AC073592.5-201ENST00000624854 528 ntBASIC20.61■□□□□ 0.89
TOP1P11387 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
TOP1P11387 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP1P11387 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP1P11387 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 AC079776.2-201ENST00000641154 1609 ntBASIC20.6■□□□□ 0.89
TOP1P11387 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TOP1P11387 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP1P11387 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TOP1P11387 SLC25A6P5-201ENST00000435663 894 ntBASIC20.6■□□□□ 0.89
TOP1P11387 AC018712.1-201ENST00000455767 687 ntBASIC20.6■□□□□ 0.89
TOP1P11387 AC073648.2-201ENST00000510116 352 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms