Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.13■□□□□ 0.33
SP9P0CG40 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
SP9P0CG40 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SP9P0CG40 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SP9P0CG40 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.13■□□□□ 0.33
SP9P0CG40 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.13■□□□□ 0.33
SP9P0CG40 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.13■□□□□ 0.33
SP9P0CG40 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 GNAS-203ENST00000306120 1878 ntBASIC17.13■□□□□ 0.33
SP9P0CG40 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.13■□□□□ 0.33
SP9P0CG40 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP9P0CG40 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.12■□□□□ 0.33
SP9P0CG40 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SP9P0CG40 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.12■□□□□ 0.33
SP9P0CG40 ALG1L8P-201ENST00000533887 760 ntBASIC17.12■□□□□ 0.33
SP9P0CG40 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.12■□□□□ 0.33
SP9P0CG40 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.12■□□□□ 0.33
SP9P0CG40 MIR4515-201ENST00000584082 81 ntBASIC17.12■□□□□ 0.33
SP9P0CG40 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SP9P0CG40 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.12■□□□□ 0.33
SP9P0CG40 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.12■□□□□ 0.33
SP9P0CG40 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.12■□□□□ 0.33
SP9P0CG40 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SP9P0CG40 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP9P0CG40 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
SP9P0CG40 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.11■□□□□ 0.33
SP9P0CG40 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.11■□□□□ 0.33
SP9P0CG40 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.11■□□□□ 0.33
SP9P0CG40 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SP9P0CG40 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.11■□□□□ 0.33
SP9P0CG40 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 AC009949.1-201ENST00000623048 1830 ntBASIC17.11■□□□□ 0.33
SP9P0CG40 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.11■□□□□ 0.33
SP9P0CG40 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SP9P0CG40 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP9P0CG40 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
SP9P0CG40 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
SP9P0CG40 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SP9P0CG40 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SP9P0CG40 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.1■□□□□ 0.33
SP9P0CG40 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.1■□□□□ 0.33
SP9P0CG40 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms