Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC22.87■■□□□ 1.25
COL5A2P05997 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL5A2P05997 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL5A2P05997 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.86■■□□□ 1.25
COL5A2P05997 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.86■■□□□ 1.25
COL5A2P05997 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC22.86■■□□□ 1.25
COL5A2P05997 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.86■■□□□ 1.25
COL5A2P05997 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.86■■□□□ 1.25
COL5A2P05997 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.86■■□□□ 1.25
COL5A2P05997 AC008677.1-201ENST00000519230 1561 ntBASIC22.86■■□□□ 1.25
COL5A2P05997 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL5A2P05997 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL5A2P05997 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.86■■□□□ 1.25
COL5A2P05997 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
COL5A2P05997 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL5A2P05997 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
COL5A2P05997 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.86■■□□□ 1.25
COL5A2P05997 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
COL5A2P05997 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
COL5A2P05997 AC026150.2-201ENST00000564693 1156 ntBASIC22.85■■□□□ 1.25
COL5A2P05997 LINC02560-201ENST00000596379 459 ntBASIC22.85■■□□□ 1.25
COL5A2P05997 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
COL5A2P05997 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
COL5A2P05997 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.85■■□□□ 1.25
COL5A2P05997 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.85■■□□□ 1.25
COL5A2P05997 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.85■■□□□ 1.25
COL5A2P05997 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.85■■□□□ 1.25
COL5A2P05997 MEIS3P1-201ENST00000495167 958 ntBASIC22.85■■□□□ 1.25
COL5A2P05997 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.85■■□□□ 1.25
COL5A2P05997 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
COL5A2P05997 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.85■■□□□ 1.25
COL5A2P05997 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.85■■□□□ 1.25
COL5A2P05997 LINC01225-203ENST00000563550 1244 ntBASIC22.85■■□□□ 1.25
COL5A2P05997 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
COL5A2P05997 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL5A2P05997 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
COL5A2P05997 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.84■■□□□ 1.25
COL5A2P05997 AP000997.3-201ENST00000623333 2250 ntBASIC22.84■■□□□ 1.25
COL5A2P05997 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 REXO1L11P-201ENST00000620964 1927 ntBASIC22.84■■□□□ 1.25
COL5A2P05997 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL5A2P05997 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.84■■□□□ 1.25
COL5A2P05997 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.84■■□□□ 1.25
COL5A2P05997 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL5A2P05997 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL5A2P05997 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
COL5A2P05997 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL5A2P05997 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC22.83■■□□□ 1.25
COL5A2P05997 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
COL5A2P05997 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 AC007274.1-201ENST00000439805 662 ntBASIC22.83■■□□□ 1.25
COL5A2P05997 CRB3P1-201ENST00000449338 276 ntBASIC22.83■■□□□ 1.25
COL5A2P05997 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 AP005018.1-201ENST00000525475 301 ntBASIC22.83■■□□□ 1.25
COL5A2P05997 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.83■■□□□ 1.25
COL5A2P05997 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.83■■□□□ 1.25
COL5A2P05997 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL5A2P05997 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL5A2P05997 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.83■■□□□ 1.24
COL5A2P05997 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL5A2P05997 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.82■■□□□ 1.24
COL5A2P05997 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
COL5A2P05997 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
COL5A2P05997 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL5A2P05997 GK-202ENST00000378941 458 ntTSL 3 BASIC22.82■■□□□ 1.24
COL5A2P05997 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.82■■□□□ 1.24
COL5A2P05997 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.82■■□□□ 1.24
COL5A2P05997 MIR4515-201ENST00000584082 81 ntBASIC22.82■■□□□ 1.24
COL5A2P05997 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.82■■□□□ 1.24
COL5A2P05997 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL5A2P05997 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms