Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
APBA3O96018 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.23■■□□□ 1.15
APBA3O96018 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
APBA3O96018 BX276092.7-203ENST00000637198 1536 ntBASIC22.23■■□□□ 1.15
APBA3O96018 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.23■■□□□ 1.15
APBA3O96018 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
APBA3O96018 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22.23■■□□□ 1.15
APBA3O96018 ACA64.2-201ENST00000459014 129 ntBASIC22.23■■□□□ 1.15
APBA3O96018 IGHV3-72-202ENST00000621503 303 ntBASIC22.23■■□□□ 1.15
APBA3O96018 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
APBA3O96018 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
APBA3O96018 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.23■■□□□ 1.15
APBA3O96018 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.23■■□□□ 1.15
APBA3O96018 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
APBA3O96018 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
APBA3O96018 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.23■■□□□ 1.15
APBA3O96018 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.22■■□□□ 1.15
APBA3O96018 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
APBA3O96018 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
APBA3O96018 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.22■■□□□ 1.15
APBA3O96018 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC22.22■■□□□ 1.15
APBA3O96018 MIR4515-201ENST00000584082 81 ntBASIC22.22■■□□□ 1.15
APBA3O96018 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.22■■□□□ 1.15
APBA3O96018 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.22■■□□□ 1.15
APBA3O96018 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.22■■□□□ 1.15
APBA3O96018 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
APBA3O96018 AC093677.2-201ENST00000600169 1863 ntBASIC22.22■■□□□ 1.15
APBA3O96018 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
APBA3O96018 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
APBA3O96018 MIR658-201ENST00000385210 100 ntBASIC22.21■■□□□ 1.15
APBA3O96018 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC22.21■■□□□ 1.15
APBA3O96018 AC092658.1-201ENST00000505836 891 ntBASIC22.21■■□□□ 1.15
APBA3O96018 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.21■■□□□ 1.15
APBA3O96018 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.21■■□□□ 1.15
APBA3O96018 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC22.21■■□□□ 1.15
APBA3O96018 MIR6805-201ENST00000615055 62 ntBASIC22.21■■□□□ 1.15
APBA3O96018 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.21■■□□□ 1.15
APBA3O96018 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.21■■□□□ 1.15
APBA3O96018 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.21■■□□□ 1.15
APBA3O96018 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
APBA3O96018 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.21■■□□□ 1.15
APBA3O96018 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.21■■□□□ 1.15
APBA3O96018 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
APBA3O96018 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
APBA3O96018 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
APBA3O96018 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
APBA3O96018 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.2■■□□□ 1.14
APBA3O96018 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
APBA3O96018 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.2■■□□□ 1.14
APBA3O96018 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.2■■□□□ 1.14
APBA3O96018 AC098614.1-201ENST00000368528 745 ntBASIC22.2■■□□□ 1.14
APBA3O96018 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.2■■□□□ 1.14
APBA3O96018 AC079776.1-201ENST00000401540 1152 ntBASIC22.2■■□□□ 1.14
APBA3O96018 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.2■■□□□ 1.14
APBA3O96018 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.2■■□□□ 1.14
APBA3O96018 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.2■■□□□ 1.14
APBA3O96018 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 AL162274.1-201ENST00000617191 1098 ntBASIC22.2■■□□□ 1.14
APBA3O96018 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
APBA3O96018 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
APBA3O96018 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 INE1-201ENST00000456273 945 ntBASIC22.19■■□□□ 1.14
APBA3O96018 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.19■■□□□ 1.14
APBA3O96018 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.19■■□□□ 1.14
APBA3O96018 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
APBA3O96018 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.19■■□□□ 1.14
APBA3O96018 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC22.19■■□□□ 1.14
APBA3O96018 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
APBA3O96018 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
APBA3O96018 AC007541.1-201ENST00000570282 1469 ntBASIC22.19■■□□□ 1.14
APBA3O96018 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
APBA3O96018 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
APBA3O96018 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
APBA3O96018 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
APBA3O96018 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms