Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3O95983 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3O95983 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
MBD3O95983 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
MBD3O95983 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MBD3O95983 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
MBD3O95983 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD3O95983 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD3O95983 AC006449.5-201ENST00000610658 2098 ntBASIC20.14■□□□□ 0.81
MBD3O95983 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.14■□□□□ 0.81
MBD3O95983 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.14■□□□□ 0.81
MBD3O95983 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.14■□□□□ 0.81
MBD3O95983 SLC25A1P3-201ENST00000395415 828 ntBASIC20.14■□□□□ 0.81
MBD3O95983 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
MBD3O95983 PVRIG2P-201ENST00000435460 978 ntBASIC20.14■□□□□ 0.81
MBD3O95983 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.14■□□□□ 0.81
MBD3O95983 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.14■□□□□ 0.81
MBD3O95983 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.14■□□□□ 0.81
MBD3O95983 MIR3917-201ENST00000580971 93 ntBASIC20.14■□□□□ 0.81
MBD3O95983 FAM197Y4-202ENST00000622692 608 ntBASIC20.14■□□□□ 0.81
MBD3O95983 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.14■□□□□ 0.81
MBD3O95983 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.14■□□□□ 0.81
MBD3O95983 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
MBD3O95983 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
MBD3O95983 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3O95983 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.13■□□□□ 0.81
MBD3O95983 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3O95983 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MBD3O95983 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
MBD3O95983 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3O95983 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 PCDHA1-201ENST00000378133 2726 ntBASIC20.12■□□□□ 0.81
MBD3O95983 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 RNF216P1-203ENST00000404404 2427 ntBASIC20.12■□□□□ 0.81
MBD3O95983 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 AC093525.9-201ENST00000624961 1746 ntBASIC20.12■□□□□ 0.81
MBD3O95983 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 CYP2T1P-202ENST00000641596 2535 ntBASIC20.12■□□□□ 0.81
MBD3O95983 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
MBD3O95983 AL391005.1-201ENST00000623953 2435 ntBASIC20.12■□□□□ 0.81
MBD3O95983 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.12■□□□□ 0.81
MBD3O95983 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3O95983 AC092053.1-201ENST00000605787 1936 ntBASIC20.12■□□□□ 0.81
MBD3O95983 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms