Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.68□□□□□ -0.7
HERC2O95714 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC10.68□□□□□ -0.7
HERC2O95714 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.68□□□□□ -0.7
HERC2O95714 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
HERC2O95714 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 AC097637.2-201ENST00000624096 1997 ntBASIC10.68□□□□□ -0.7
HERC2O95714 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
HERC2O95714 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HERC2O95714 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
HERC2O95714 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
HERC2O95714 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 FBXW4P1-201ENST00000426721 2239 ntBASIC10.67□□□□□ -0.7
HERC2O95714 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
HERC2O95714 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 HMGA1P7-201ENST00000406908 502 ntBASIC10.67□□□□□ -0.7
HERC2O95714 KRT43P-201ENST00000434019 910 ntBASIC10.67□□□□□ -0.7
HERC2O95714 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.67□□□□□ -0.7
HERC2O95714 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 PPOX-204ENST00000462866 473 ntTSL 5 BASIC10.67□□□□□ -0.7
HERC2O95714 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.67□□□□□ -0.7
HERC2O95714 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 MIR1227-201ENST00000408484 88 ntBASIC10.67□□□□□ -0.7
HERC2O95714 RPL37AP1-201ENST00000412502 279 ntBASIC10.67□□□□□ -0.7
HERC2O95714 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 AC123567.1-201ENST00000548294 1261 ntBASIC10.67□□□□□ -0.7
HERC2O95714 MIR4750-201ENST00000584564 56 ntBASIC10.67□□□□□ -0.7
HERC2O95714 AC018635.2-201ENST00000608625 364 ntBASIC10.67□□□□□ -0.7
HERC2O95714 AL645728.2-201ENST00000641974 660 ntBASIC10.67□□□□□ -0.7
HERC2O95714 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.67□□□□□ -0.7
HERC2O95714 AC055876.2-201ENST00000531834 546 ntBASIC10.67□□□□□ -0.7
HERC2O95714 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC10.67□□□□□ -0.7
HERC2O95714 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.67□□□□□ -0.7
HERC2O95714 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.67□□□□□ -0.7
HERC2O95714 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
HERC2O95714 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
HERC2O95714 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.66□□□□□ -0.7
HERC2O95714 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
HERC2O95714 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
HERC2O95714 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 Z82202.1-201ENST00000623446 1880 ntBASIC10.66□□□□□ -0.7
HERC2O95714 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.66□□□□□ -0.7
HERC2O95714 AP000812.2-201ENST00000538934 718 ntBASIC10.66□□□□□ -0.7
HERC2O95714 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.66□□□□□ -0.7
HERC2O95714 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.66□□□□□ -0.7
HERC2O95714 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC10.66□□□□□ -0.7
HERC2O95714 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC10.66□□□□□ -0.7
HERC2O95714 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
HERC2O95714 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 PFN1P12-201ENST00000455938 534 ntBASIC10.66□□□□□ -0.7
HERC2O95714 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.66□□□□□ -0.7
HERC2O95714 AL138918.1-201ENST00000568306 659 ntBASIC10.66□□□□□ -0.7
HERC2O95714 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
HERC2O95714 AC233724.13-201ENST00000598383 410 ntBASIC10.66□□□□□ -0.7
HERC2O95714 AL161645.1-201ENST00000622716 1255 ntBASIC10.66□□□□□ -0.7
HERC2O95714 PLS3-210ENST00000626746 216 ntTSL 4 BASIC10.66□□□□□ -0.7
HERC2O95714 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.66□□□□□ -0.7
HERC2O95714 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HERC2O95714 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC10.66□□□□□ -0.7
HERC2O95714 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms