Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 AC111152.3-201ENST00000569699 673 ntBASIC16.37■□□□□ 0.21
SOX30O94993 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX30O94993 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SOX30O94993 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 AL023806.1-201ENST00000603994 1649 ntBASIC16.37■□□□□ 0.21
SOX30O94993 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.36■□□□□ 0.21
SOX30O94993 PCED1CP-201ENST00000419887 785 ntBASIC16.36■□□□□ 0.21
SOX30O94993 AC007967.3-201ENST00000434308 558 ntBASIC16.36■□□□□ 0.21
SOX30O94993 DRAXINP1-201ENST00000437611 948 ntBASIC16.36■□□□□ 0.21
SOX30O94993 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.36■□□□□ 0.21
SOX30O94993 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 Z69720.1-201ENST00000601483 472 ntBASIC16.36■□□□□ 0.21
SOX30O94993 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.36■□□□□ 0.21
SOX30O94993 AP000550.4-202ENST00000639755 178 ntBASIC16.36■□□□□ 0.21
SOX30O94993 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SOX30O94993 AC016734.2-201ENST00000624325 1377 ntBASIC16.36■□□□□ 0.21
SOX30O94993 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SOX30O94993 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SOX30O94993 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX30O94993 AC106820.2-201ENST00000563775 3264 ntBASIC16.36■□□□□ 0.21
SOX30O94993 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.35■□□□□ 0.21
SOX30O94993 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 TSSC2-201ENST00000450217 709 ntBASIC16.35■□□□□ 0.21
SOX30O94993 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.35■□□□□ 0.21
SOX30O94993 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.35■□□□□ 0.21
SOX30O94993 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.35■□□□□ 0.21
SOX30O94993 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 AL139327.4-201ENST00000612362 153 ntBASIC16.35■□□□□ 0.21
SOX30O94993 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX30O94993 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX30O94993 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX30O94993 IER3-202ENST00000376377 1350 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms