Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDKL5O76039 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.42■□□□□ 0.86
CDKL5O76039 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.42■□□□□ 0.86
CDKL5O76039 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CDKL5O76039 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDKL5O76039 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 TP73-AS1-210ENST00000637775 1455 ntBASIC20.42■□□□□ 0.86
CDKL5O76039 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.42■□□□□ 0.86
CDKL5O76039 AL049757.1-201ENST00000616842 1596 ntBASIC20.42■□□□□ 0.86
CDKL5O76039 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.42■□□□□ 0.86
CDKL5O76039 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL5O76039 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL5O76039 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDKL5O76039 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDKL5O76039 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDKL5O76039 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDKL5O76039 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.41■□□□□ 0.86
CDKL5O76039 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDKL5O76039 IGHV3-47-201ENST00000425060 335 ntBASIC20.41■□□□□ 0.86
CDKL5O76039 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL5O76039 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.41■□□□□ 0.86
CDKL5O76039 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.41■□□□□ 0.86
CDKL5O76039 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDKL5O76039 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDKL5O76039 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CDKL5O76039 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL5O76039 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL5O76039 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CDKL5O76039 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CDKL5O76039 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDKL5O76039 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.4■□□□□ 0.86
CDKL5O76039 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 AC104819.1-201ENST00000504587 486 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AC096582.2-201ENST00000510860 516 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AP000867.3-201ENST00000524675 377 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 FZD10-202ENST00000539839 3282 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AC108860.2-201ENST00000562760 2183 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AC074051.2-201ENST00000565115 352 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AC012615.1-201ENST00000565797 1299 ntBASIC20.4■□□□□ 0.86
CDKL5O76039 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.4■□□□□ 0.86
CDKL5O76039 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDKL5O76039 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.4■□□□□ 0.86
CDKL5O76039 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL5O76039 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL5O76039 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.39■□□□□ 0.86
CDKL5O76039 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.39■□□□□ 0.86
CDKL5O76039 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL5O76039 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL5O76039 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL5O76039 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL5O76039 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL5O76039 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL5O76039 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.39■□□□□ 0.85
CDKL5O76039 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.39■□□□□ 0.85
CDKL5O76039 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.39■□□□□ 0.85
CDKL5O76039 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 BNIP3P18-201ENST00000593976 575 ntBASIC20.39■□□□□ 0.85
CDKL5O76039 AC092329.2-201ENST00000598402 547 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms