Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 AC141586.3-201ENST00000562166 1838 ntBASIC16.89■□□□□ 0.29
GFRA3O60609 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 AC020907.1-201ENST00000616460 1350 ntBASIC16.89■□□□□ 0.29
GFRA3O60609 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 TCF3P1-201ENST00000423021 1937 ntBASIC16.88■□□□□ 0.29
GFRA3O60609 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA3O60609 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
GFRA3O60609 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
GFRA3O60609 DFFBP1-201ENST00000433250 979 ntBASIC16.88■□□□□ 0.29
GFRA3O60609 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA3O60609 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.88■□□□□ 0.29
GFRA3O60609 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.88■□□□□ 0.29
GFRA3O60609 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.88■□□□□ 0.29
GFRA3O60609 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.88■□□□□ 0.29
GFRA3O60609 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA3O60609 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.88■□□□□ 0.29
GFRA3O60609 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.88■□□□□ 0.29
GFRA3O60609 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.88■□□□□ 0.29
GFRA3O60609 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GFRA3O60609 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
GFRA3O60609 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.88■□□□□ 0.29
GFRA3O60609 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFRA3O60609 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.87■□□□□ 0.29
GFRA3O60609 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.87■□□□□ 0.29
GFRA3O60609 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.87■□□□□ 0.29
GFRA3O60609 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 BNIP3P42-201ENST00000454982 569 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 BNIP3P29-201ENST00000598302 571 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 AC244093.1-201ENST00000610837 814 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 AC011447.5-201ENST00000616168 564 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.87■□□□□ 0.29
GFRA3O60609 AC012183.1-201ENST00000625197 499 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.87■□□□□ 0.29
GFRA3O60609 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.87■□□□□ 0.29
GFRA3O60609 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
GFRA3O60609 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GFRA3O60609 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 LINC01006-201ENST00000333319 2292 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
GFRA3O60609 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 AC132938.6-201ENST00000623828 1655 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.86■□□□□ 0.29
GFRA3O60609 AC009477.1-201ENST00000452936 217 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 AC109462.3-201ENST00000573934 613 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 AC008494.3-201ENST00000606615 944 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 AC008738.7-201ENST00000609744 511 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 MIR6775-201ENST00000617557 69 ntBASIC16.86■□□□□ 0.29
GFRA3O60609 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.86■□□□□ 0.29
GFRA3O60609 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.86■□□□□ 0.29
GFRA3O60609 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GFRA3O60609 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms