Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.92□□□□□ -0.18
CUBNO60494 AL359881.2-201ENST00000602973 570 ntBASIC13.92□□□□□ -0.18
CUBNO60494 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 AC006116.8-202ENST00000587620 1550 ntBASIC13.92□□□□□ -0.18
CUBNO60494 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.92□□□□□ -0.18
CUBNO60494 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 PTCHD3P3-201ENST00000403073 906 ntBASIC13.92□□□□□ -0.18
CUBNO60494 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 AL512356.2-201ENST00000546955 174 ntBASIC13.92□□□□□ -0.18
CUBNO60494 AC243562.1-201ENST00000560672 389 ntBASIC13.92□□□□□ -0.18
CUBNO60494 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 MIR6799-201ENST00000620297 69 ntBASIC13.92□□□□□ -0.18
CUBNO60494 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 GMCL1P1-201ENST00000463439 1581 ntBASIC13.92□□□□□ -0.18
CUBNO60494 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUBNO60494 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CUBNO60494 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CUBNO60494 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.92□□□□□ -0.18
CUBNO60494 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CUBNO60494 CNN2P2-201ENST00000443536 909 ntBASIC13.91□□□□□ -0.18
CUBNO60494 CNN2P3-201ENST00000450201 906 ntBASIC13.91□□□□□ -0.18
CUBNO60494 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 AL136317.3-201ENST00000618497 906 ntBASIC13.91□□□□□ -0.18
CUBNO60494 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 SPTLC1P1-201ENST00000447199 261 ntBASIC13.91□□□□□ -0.18
CUBNO60494 AC067863.1-201ENST00000494933 530 ntBASIC13.91□□□□□ -0.18
CUBNO60494 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CUBNO60494 ATP5G2P4-201ENST00000442175 420 ntBASIC13.91□□□□□ -0.18
CUBNO60494 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.91□□□□□ -0.18
CUBNO60494 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 AP000997.3-201ENST00000623333 2250 ntBASIC13.91□□□□□ -0.18
CUBNO60494 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CUBNO60494 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC13.91□□□□□ -0.18
CUBNO60494 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms