Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 LINC00265-3P-201ENST00000447588 903 ntBASIC15.53■□□□□ 0.08
NPIPB4C9JG80 STK19B-204ENST00000512515 211 ntBASIC15.53■□□□□ 0.08
NPIPB4C9JG80 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPB4C9JG80 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AC132938.5-201ENST00000624980 1813 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 KLF4P1-201ENST00000412782 1185 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AC104819.1-201ENST00000504587 486 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 KRT18P35-201ENST00000510488 1269 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AC124947.2-201ENST00000547118 1133 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 AL358472.4-201ENST00000633140 710 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 LTB4R2-202ENST00000528054 3092 ntBASIC15.52■□□□□ 0.08
NPIPB4C9JG80 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPB4C9JG80 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 PMPCAP1-201ENST00000508114 1576 ntBASIC15.52■□□□□ 0.07
NPIPB4C9JG80 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPB4C9JG80 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 AC096582.2-201ENST00000510860 516 ntBASIC15.51■□□□□ 0.07
NPIPB4C9JG80 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPB4C9JG80 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms