Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 AC027307.2-201ENST00000591252 911 ntBASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 AC018529.1-201ENST00000613063 361 ntBASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 AL590787.1-201ENST00000568856 1315 ntBASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85CA6NKD9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 SPDYE19P-201ENST00000338590 713 ntBASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 AC108725.1-201ENST00000495472 409 ntBASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 AC243960.2-201ENST00000600996 747 ntBASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 AC106872.11-201ENST00000605838 421 ntBASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC85CA6NKD9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 SLC25A24P2-201ENST00000415059 510 ntBASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 SLC25A6P2-201ENST00000497974 877 ntBASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 AC008267.7-201ENST00000624570 1194 ntBASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 AC087499.5-201ENST00000452760 1342 ntBASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85CA6NKD9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 LDHBP1-201ENST00000455730 1119 ntBASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC85CA6NKD9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC85CA6NKD9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms