Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 IGHV3-47-201ENST00000425060 335 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KRT17P6-201ENST00000453795 1220 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 VENTXP7-201ENST00000475503 772 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC009533.2-201ENST00000543664 586 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BNIP3P18-201ENST00000593976 575 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC011467.2-201ENST00000598425 242 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC069148.1-201ENST00000608741 768 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC138932.1-201ENST00000534164 6830 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NSUN5P1-202ENST00000421140 1535 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NSUN5P2-203ENST00000457352 1529 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 Z69720.1-201ENST00000601483 472 ntBASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC092119.3-201ENST00000612618 583 ntBASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TP73-AS1-210ENST00000637775 1455 ntBASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BCL2-203ENST00000589955 5011 ntBASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SLC25A1P3-201ENST00000395415 828 ntBASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms