Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 AC060834.1-201ENST00000443027 2032 ntBASIC20.06■□□□□ 0.8
CLIC4Q9Y696 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 AC002558.1-201ENST00000488906 803 ntBASIC20.06■□□□□ 0.8
CLIC4Q9Y696 AC091607.1-201ENST00000490318 1060 ntBASIC20.06■□□□□ 0.8
CLIC4Q9Y696 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 IGHV3-41-201ENST00000613121 348 ntBASIC20.06■□□□□ 0.8
CLIC4Q9Y696 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 SLC25A1P3-201ENST00000395415 828 ntBASIC20.05■□□□□ 0.8
CLIC4Q9Y696 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 KRT8P26-201ENST00000534154 1276 ntBASIC20.05■□□□□ 0.8
CLIC4Q9Y696 AL138831.2-201ENST00000606564 490 ntBASIC20.05■□□□□ 0.8
CLIC4Q9Y696 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC4Q9Y696 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 HCG11-201ENST00000411553 5696 ntBASIC20.04■□□□□ 0.8
CLIC4Q9Y696 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AC109462.3-201ENST00000573934 613 ntBASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AC084018.2-201ENST00000613093 2607 ntBASIC20.04■□□□□ 0.8
CLIC4Q9Y696 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC4Q9Y696 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AC005332.1-201ENST00000577698 1310 ntBASIC20.03■□□□□ 0.8
CLIC4Q9Y696 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 FAM86EP-206ENST00000510506 987 ntBASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AC090616.6-201ENST00000582640 721 ntBASIC20.03■□□□□ 0.8
CLIC4Q9Y696 NTF6B-201ENST00000591913 560 ntBASIC20.03■□□□□ 0.8
CLIC4Q9Y696 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.03■□□□□ 0.8
CLIC4Q9Y696 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC4Q9Y696 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms