Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 SIRPAP1-201ENST00000448467 1770 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 COX5BP2-201ENST00000392354 334 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AC211486.1-202ENST00000416371 468 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AC211476.1-201ENST00000503899 468 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AL589182.2-201ENST00000619332 1049 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 PHGDH-209ENST00000641074 1780 ntBASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX11Q9Y5W9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 ABALON-201ENST00000629058 1903 ntBASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AC093010.1-201ENST00000473625 1624 ntBASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNX11Q9Y5W9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 AC093677.2-201ENST00000600169 1863 ntBASIC17.36■□□□□ 0.37
SNX11Q9Y5W9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms