Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 MIR574-201ENST00000385209 96 ntBASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 KRT18P58-201ENST00000527480 1120 ntBASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 BNIP3P18-201ENST00000593976 575 ntBASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 AC100803.2-201ENST00000562459 1963 ntBASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 AC139530.3-201ENST00000620344 690 ntBASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 TP73-AS1-207ENST00000624167 988 ntBASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB11Q9Y5F2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 RPS2P28-201ENST00000314255 741 ntBASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 RNPS1P1-201ENST00000507437 918 ntBASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 AC073648.2-201ENST00000510116 352 ntBASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 AC008608.2-201ENST00000606089 416 ntBASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB11Q9Y5F2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms