Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 AC093677.2-201ENST00000600169 1863 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 AC099522.2-201ENST00000607001 744 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 BSG-214ENST00000614867 960 ntTSL 3 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 AF228730.6-201ENST00000641497 218 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 AC084121.3-201ENST00000641716 218 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 AC105233.6-201ENST00000642093 218 ntBASIC22■■□□□ 1.11
RTCBQ9Y3I0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RTCBQ9Y3I0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCBQ9Y3I0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SPDYE11-202ENST00000450699 704 ntBASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SPDYE9P-201ENST00000570642 692 ntBASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SPDYE10P-202ENST00000612005 668 ntBASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SPDYE8P-202ENST00000612377 668 ntBASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCBQ9Y3I0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 CNN2P2-201ENST00000443536 909 ntBASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 CNN2P3-201ENST00000450201 906 ntBASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 AL136317.3-201ENST00000618497 906 ntBASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 AC129492.6-201ENST00000611383 1305 ntBASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTCBQ9Y3I0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms