Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 OR6D1P-203ENST00000641209 4860 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AC103702.1-201ENST00000548801 2630 ntBASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AC008687.5-201ENST00000593746 558 ntBASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AL023973.1-201ENST00000624619 620 ntBASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HHLA3Q9XRX5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.9□□□□□ -0.34
HHLA3Q9XRX5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms