Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 TERF1P1-201ENST00000311003 1181 ntBASIC20.66■□□□□ 0.9
SMC3Q9UQE7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 MIR662-201ENST00000384847 95 ntBASIC20.66■□□□□ 0.9
SMC3Q9UQE7 AC068472.1-201ENST00000474589 881 ntBASIC20.66■□□□□ 0.9
SMC3Q9UQE7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 GPR32P1-201ENST00000601788 811 ntBASIC20.66■□□□□ 0.9
SMC3Q9UQE7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.66■□□□□ 0.9
SMC3Q9UQE7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.66■□□□□ 0.9
SMC3Q9UQE7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 AC117947.1-201ENST00000427448 529 ntBASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.65■□□□□ 0.9
SMC3Q9UQE7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMC3Q9UQE7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SMC3Q9UQE7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMC3Q9UQE7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SMC3Q9UQE7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMC3Q9UQE7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMC3Q9UQE7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 LINC01311-201ENST00000565162 1445 ntBASIC20.63■□□□□ 0.89
SMC3Q9UQE7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 KRT18P38-201ENST00000449496 1282 ntBASIC20.63■□□□□ 0.89
SMC3Q9UQE7 AL359075.1-203ENST00000462729 1002 ntBASIC20.63■□□□□ 0.89
SMC3Q9UQE7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 AC012306.2-201ENST00000609350 630 ntBASIC20.63■□□□□ 0.89
SMC3Q9UQE7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMC3Q9UQE7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 AC073508.3-201ENST00000619697 1419 ntBASIC20.62■□□□□ 0.89
SMC3Q9UQE7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms