Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC004461.1-201ENST00000412461 403 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ATP5G2P4-201ENST00000442175 420 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 CR383656.12-201ENST00000549567 513 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC048344.4-201ENST00000619744 527 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.62■□□□□ 0.25
LHX6Q9UPM6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.62■□□□□ 0.25
LHX6Q9UPM6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 HCG4B-203ENST00000450128 991 ntBASIC16.62■□□□□ 0.25
LHX6Q9UPM6 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 KRT18P41-201ENST00000518924 1277 ntBASIC16.62■□□□□ 0.25
LHX6Q9UPM6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 AL132657.2-201ENST00000564417 358 ntBASIC16.62■□□□□ 0.25
LHX6Q9UPM6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX6Q9UPM6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 AC023141.5-201ENST00000458585 616 ntBASIC16.61■□□□□ 0.25
LHX6Q9UPM6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 AC022148.2-201ENST00000586176 560 ntBASIC16.61■□□□□ 0.25
LHX6Q9UPM6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.61■□□□□ 0.25
LHX6Q9UPM6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms