Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SIGLEC30P-201ENST00000455569 941 ntBASIC18.76■□□□□ 0.59
SIX4Q9UIU6 AF186996.4-201ENST00000467186 377 ntBASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 AL049840.3-201ENST00000602669 611 ntBASIC18.76■□□□□ 0.59
SIX4Q9UIU6 AL773604.1-201ENST00000617417 272 ntBASIC18.76■□□□□ 0.59
SIX4Q9UIU6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX4Q9UIU6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 FAM215A-202ENST00000632077 792 ntBASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIX4Q9UIU6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AL135999.2-201ENST00000622438 1686 ntBASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AL031284.1-201ENST00000419297 478 ntBASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AL662844.1-201ENST00000546340 181 ntBASIC18.74■□□□□ 0.59
SIX4Q9UIU6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AC064862.7-201ENST00000604520 867 ntBASIC18.74■□□□□ 0.59
SIX4Q9UIU6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 MIR7706-201ENST00000613747 67 ntBASIC18.74■□□□□ 0.59
SIX4Q9UIU6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX4Q9UIU6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 PP12613-201ENST00000424958 2230 ntBASIC18.73■□□□□ 0.59
SIX4Q9UIU6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX4Q9UIU6 AC012640.2-201ENST00000561606 901 ntBASIC18.73■□□□□ 0.59
SIX4Q9UIU6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms