Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 PCED1CP-201ENST00000419887 785 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 AL450487.1-201ENST00000426799 995 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 YBX1P2-201ENST00000489612 999 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 AC009065.1-201ENST00000564055 1225 ntBASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 KRT18P23-201ENST00000435622 1283 ntBASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCM2LQ9NUG4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AL138966.2-201ENST00000621997 464 ntBASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 AC096733.2-201ENST00000609937 1394 ntBASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCM2LQ9NUG4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms