Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AC246785.2-201ENST00000432512 513 ntBASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AL138831.2-201ENST00000606564 490 ntBASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC40Q9H9A6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 AC005336.2-201ENST00000593183 939 ntBASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 AL139327.4-201ENST00000612362 153 ntBASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC40Q9H9A6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC016396.2-201ENST00000562575 1417 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 VENTXP7-201ENST00000475503 772 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC087388.1-201ENST00000571370 1112 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC116407.4-201ENST00000623319 1061 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC080080.1-201ENST00000625121 2420 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC106820.2-201ENST00000563775 3264 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 AC012313.1-201ENST00000593393 3059 ntBASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms