Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.72■□□□□ 0.75
BCAS3Q9H6U6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AC007967.2-201ENST00000432613 625 ntBASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AC004706.3-202ENST00000621574 984 ntBASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BCAS3Q9H6U6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 KLF4P1-201ENST00000412782 1185 ntBASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AC116407.2-201ENST00000613639 860 ntBASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 AC139530.3-201ENST00000620344 690 ntBASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BCAS3Q9H6U6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 ELK2BP-201ENST00000415014 1224 ntBASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms