Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 FAM86GP-201ENST00000448322 971 ntBASIC19.11■□□□□ 0.65
HIPK3Q9H422 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 MIR4745-201ENST00000577608 62 ntBASIC19.1■□□□□ 0.65
HIPK3Q9H422 AC138761.1-201ENST00000584393 385 ntBASIC19.1■□□□□ 0.65
HIPK3Q9H422 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK3Q9H422 AL096828.2-201ENST00000567259 1965 ntBASIC19.1■□□□□ 0.65
HIPK3Q9H422 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.1■□□□□ 0.65
HIPK3Q9H422 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 TNXA-203ENST00000507684 2038 ntBASIC19.09■□□□□ 0.65
HIPK3Q9H422 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC092919.2-201ENST00000623631 1645 ntBASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC100803.2-201ENST00000562459 1963 ntBASIC19.09■□□□□ 0.65
HIPK3Q9H422 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC006116.8-202ENST00000587620 1550 ntBASIC19.09■□□□□ 0.65
HIPK3Q9H422 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 AC009949.1-201ENST00000623048 1830 ntBASIC19.09■□□□□ 0.65
HIPK3Q9H422 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK3Q9H422 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HIPK3Q9H422 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIPK3Q9H422 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms