Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE2OQ9C0C9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBE2OQ9C0C9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2OQ9C0C9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 RN7SL204P-201ENST00000582831 262 ntBASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 AL359881.2-201ENST00000602973 570 ntBASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2OQ9C0C9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 AC007064.4-201ENST00000637740 555 ntBASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBE2OQ9C0C9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 OR8S1-201ENST00000310194 1080 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 TFAMP1-201ENST00000412727 736 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 RHOQP3-201ENST00000437982 621 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 SIGLEC30P-201ENST00000455569 941 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 AC015911.4-201ENST00000588022 1070 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 AC073592.5-201ENST00000624854 528 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 NCF1C-201ENST00000438382 1427 ntBASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2OQ9C0C9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 AL020989.1-201ENST00000422979 469 ntBASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 MEIS3P1-201ENST00000495167 958 ntBASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 AC122714.2-201ENST00000502787 707 ntBASIC19.29■□□□□ 0.68
UBE2OQ9C0C9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms