Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM6Q9C030 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM6Q9C030 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM6Q9C030 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM6Q9C030 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM6Q9C030 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM6Q9C030 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 RPS2P28-201ENST00000314255 741 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 AL022342.1-201ENST00000400363 863 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 AC120114.3-201ENST00000611923 658 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 AC148477.8-201ENST00000624298 468 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 AC009113.1-201ENST00000570267 2443 ntBASIC19.31■□□□□ 0.68
TRIM6Q9C030 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM6Q9C030 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM6Q9C030 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 AC100803.2-201ENST00000562459 1963 ntBASIC19.3■□□□□ 0.68
TRIM6Q9C030 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 AC103564.2-201ENST00000432853 1299 ntBASIC19.3■□□□□ 0.68
TRIM6Q9C030 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 SART3-203ENST00000546611 1184 ntBASIC19.3■□□□□ 0.68
TRIM6Q9C030 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 AL139288.1-201ENST00000623748 933 ntBASIC19.3■□□□□ 0.68
TRIM6Q9C030 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM6Q9C030 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM6Q9C030 TNRC18P3-201ENST00000441896 2691 ntBASIC19.29■□□□□ 0.68
TRIM6Q9C030 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM6Q9C030 COX5BP2-201ENST00000392354 334 ntBASIC19.29■□□□□ 0.68
TRIM6Q9C030 AL590627.1-203ENST00000421194 1026 ntBASIC19.29■□□□□ 0.68
TRIM6Q9C030 AC018712.1-201ENST00000455767 687 ntBASIC19.29■□□□□ 0.68
TRIM6Q9C030 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM6Q9C030 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms