Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 AC009093.7-201ENST00000623853 1223 ntBASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 LINC00628-201ENST00000628516 1289 ntBASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 AP000974.1-201ENST00000623909 2387 ntBASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH11XQ9BZA7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 AC002056.1-201ENST00000395613 760 ntBASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 AL355306.1-201ENST00000415580 579 ntBASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 FLJ13224-201ENST00000313737 1514 ntBASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH11XQ9BZA7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 AC099522.2-201ENST00000607001 744 ntBASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 AC129492.6-201ENST00000611383 1305 ntBASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH11XQ9BZA7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 AL627223.1-201ENST00000416693 442 ntBASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 TIMM8BP1-201ENST00000452384 211 ntBASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 AC093520.2-201ENST00000561830 333 ntBASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 AC005498.2-205ENST00000593218 784 ntBASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH11XQ9BZA7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms