Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHANK2-AS3Q9BTD1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 IGHGP-201ENST00000390555 1178 ntBASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 SLC25A3P1-201ENST00000443844 931 ntBASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 COX11P1-201ENST00000489116 835 ntBASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.54□□□□□ -0.24
SHANK2-AS3Q9BTD1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 STARP1-201ENST00000397973 869 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 SPDYE15P-201ENST00000424157 909 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 LIN28AP1-201ENST00000429574 405 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 MTCL1P1-201ENST00000446207 792 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ATP5G1P1-201ENST00000448724 379 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC002558.1-201ENST00000488906 803 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AP003733.1-201ENST00000491725 852 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AL441883.1-201ENST00000566170 1045 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 AL353692.3-201ENST00000407031 1396 ntBASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHANK2-AS3Q9BTD1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.52□□□□□ -0.24
SHANK2-AS3Q9BTD1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms