Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
COL21A1Q96P44 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
COL21A1Q96P44 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 OR6D1P-203ENST00000641209 4860 ntBASIC16.64■□□□□ 0.25
COL21A1Q96P44 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 TSPY12P-201ENST00000421279 868 ntBASIC16.64■□□□□ 0.25
COL21A1Q96P44 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 BX276092.5-203ENST00000456199 560 ntBASIC16.64■□□□□ 0.25
COL21A1Q96P44 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 KRT8P26-201ENST00000534154 1276 ntBASIC16.64■□□□□ 0.25
COL21A1Q96P44 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 AL121672.3-201ENST00000608644 468 ntBASIC16.64■□□□□ 0.25
COL21A1Q96P44 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.25
COL21A1Q96P44 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL21A1Q96P44 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AL023806.1-201ENST00000603994 1649 ntBASIC16.63■□□□□ 0.25
COL21A1Q96P44 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AC133963.1-201ENST00000504166 1679 ntBASIC16.63■□□□□ 0.25
COL21A1Q96P44 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 KRT18P65-201ENST00000439811 1286 ntBASIC16.63■□□□□ 0.25
COL21A1Q96P44 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.63■□□□□ 0.25
COL21A1Q96P44 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL21A1Q96P44 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.63■□□□□ 0.25
COL21A1Q96P44 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms