Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL353593.2-201ENST00000602529 1483 ntBASIC18.13■□□□□ 0.49
RPRD1AQ96P16 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 FGFR3P6-201ENST00000457012 610 ntBASIC18.12■□□□□ 0.49
RPRD1AQ96P16 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 AC134043.2-201ENST00000624206 2238 ntBASIC18.12■□□□□ 0.49
RPRD1AQ96P16 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.12■□□□□ 0.49
RPRD1AQ96P16 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPRD1AQ96P16 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 AL133373.2-201ENST00000623187 2828 ntBASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 AC005104.2-201ENST00000427818 678 ntBASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.11■□□□□ 0.49
RPRD1AQ96P16 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 AL355312.1-201ENST00000407115 2176 ntBASIC18.11■□□□□ 0.49
RPRD1AQ96P16 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPRD1AQ96P16 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 AL160237.2-201ENST00000556165 472 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 AC104692.2-201ENST00000603054 253 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 LINC01451-201ENST00000623792 534 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 NOC2LP2-201ENST00000407594 1944 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPRD1AQ96P16 AL356309.3-201ENST00000624132 1934 ntBASIC18.1■□□□□ 0.49
RPRD1AQ96P16 AC132938.5-201ENST00000624980 1813 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms