Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC092919.2-201ENST00000623631 1645 ntBASIC14.84□□□□□ -0.03
SPG11Q96JI7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 AC236430.1-201ENST00000402231 743 ntBASIC14.84□□□□□ -0.03
SPG11Q96JI7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 AC069335.1-201ENST00000489972 472 ntBASIC14.84□□□□□ -0.03
SPG11Q96JI7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
SPG11Q96JI7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPG11Q96JI7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.83□□□□□ -0.03
SPG11Q96JI7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SPG11Q96JI7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.83□□□□□ -0.03
SPG11Q96JI7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
SPG11Q96JI7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 FAM185BP-201ENST00000443595 716 ntBASIC14.83□□□□□ -0.04
SPG11Q96JI7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 PHGDH-209ENST00000641074 1780 ntBASIC14.83□□□□□ -0.04
SPG11Q96JI7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.83□□□□□ -0.04
SPG11Q96JI7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPG11Q96JI7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 PI4KAP1-204ENST00000612579 1703 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC107890.1-201ENST00000422478 521 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms