Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 AC018695.7-201ENST00000624587 2492 ntBASIC16.78■□□□□ 0.28
ITCHQ96J02 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.77■□□□□ 0.28
ITCHQ96J02 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.77■□□□□ 0.28
ITCHQ96J02 AC005104.2-201ENST00000427818 678 ntBASIC16.77■□□□□ 0.28
ITCHQ96J02 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ITCHQ96J02 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.77■□□□□ 0.28
ITCHQ96J02 AC004263.2-201ENST00000617183 678 ntBASIC16.77■□□□□ 0.28
ITCHQ96J02 AL138966.2-201ENST00000621997 464 ntBASIC16.77■□□□□ 0.28
ITCHQ96J02 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ITCHQ96J02 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ITCHQ96J02 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.77■□□□□ 0.27
ITCHQ96J02 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ITCHQ96J02 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.27
ITCHQ96J02 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ITCHQ96J02 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ITCHQ96J02 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ITCHQ96J02 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ITCHQ96J02 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ITCHQ96J02 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.76■□□□□ 0.27
ITCHQ96J02 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ITCHQ96J02 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ITCHQ96J02 AC079602.3-201ENST00000623931 403 ntBASIC16.76■□□□□ 0.27
ITCHQ96J02 AL023973.1-201ENST00000624619 620 ntBASIC16.76■□□□□ 0.27
ITCHQ96J02 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ITCHQ96J02 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.76■□□□□ 0.27
ITCHQ96J02 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 LYSMD4-203ENST00000378904 2122 ntBASIC16.76■□□□□ 0.27
ITCHQ96J02 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ITCHQ96J02 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.76■□□□□ 0.27
ITCHQ96J02 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ITCHQ96J02 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ITCHQ96J02 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ITCHQ96J02 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.75■□□□□ 0.27
ITCHQ96J02 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.75■□□□□ 0.27
ITCHQ96J02 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ITCHQ96J02 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.75■□□□□ 0.27
ITCHQ96J02 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms