Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SHDQ96IW2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 AFG3L1P-217ENST00000557444 2447 ntBASIC17.64■□□□□ 0.42
SHDQ96IW2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHDQ96IW2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.64■□□□□ 0.42
SHDQ96IW2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHDQ96IW2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC015922.1-201ENST00000421102 1152 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 ADH5P3-201ENST00000433842 1137 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.64■□□□□ 0.41
SHDQ96IW2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.64■□□□□ 0.41
SHDQ96IW2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHDQ96IW2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 AL590787.1-201ENST00000568856 1315 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 AC129492.6-201ENST00000611383 1305 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC092919.2-201ENST00000623631 1645 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 AC120498.9-201ENST00000339021 3867 ntBASIC17.64■□□□□ 0.41
SHDQ96IW2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHDQ96IW2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHDQ96IW2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SHDQ96IW2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SHDQ96IW2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.63■□□□□ 0.41
SHDQ96IW2 AC055876.3-201ENST00000431496 288 ntBASIC17.63■□□□□ 0.41
SHDQ96IW2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.63■□□□□ 0.41
SHDQ96IW2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.63■□□□□ 0.41
SHDQ96IW2 RN7SL589P-201ENST00000481268 310 ntBASIC17.63■□□□□ 0.41
SHDQ96IW2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.63■□□□□ 0.41
SHDQ96IW2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.63■□□□□ 0.41
SHDQ96IW2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.63■□□□□ 0.41
SHDQ96IW2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 AC138649.4-201ENST00000612222 287 ntBASIC17.63■□□□□ 0.41
SHDQ96IW2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.63■□□□□ 0.41
SHDQ96IW2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.63■□□□□ 0.41
SHDQ96IW2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SHDQ96IW2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHDQ96IW2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
SHDQ96IW2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
SHDQ96IW2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.62■□□□□ 0.41
SHDQ96IW2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.62■□□□□ 0.41
SHDQ96IW2 AL355306.1-201ENST00000415580 579 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.62■□□□□ 0.41
SHDQ96IW2 AL592309.1-201ENST00000443127 649 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.62■□□□□ 0.41
SHDQ96IW2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 AC069335.1-201ENST00000489972 472 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.62■□□□□ 0.41
SHDQ96IW2 AL512356.2-201ENST00000546955 174 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.62■□□□□ 0.41
SHDQ96IW2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.62■□□□□ 0.41
SHDQ96IW2 AL390955.2-201ENST00000603032 514 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHDQ96IW2 ACTL9-202ENST00000612068 1252 ntBASIC17.62■□□□□ 0.41
SHDQ96IW2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.62■□□□□ 0.41
SHDQ96IW2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SHDQ96IW2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms