Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 RPS2P28-201ENST00000314255 741 ntBASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 RPS2P1-201ENST00000434010 821 ntBASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 RNA5SP419-201ENST00000515908 135 ntBASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 HNRNPDP1-201ENST00000439535 754 ntBASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 OR7E14P-202ENST00000530490 1290 ntBASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 FAM215A-202ENST00000632077 792 ntBASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 AC133963.1-201ENST00000504166 1679 ntBASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCD1Q96GM5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 LAGE3P1-201ENST00000425356 484 ntBASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 AL139327.4-201ENST00000612362 153 ntBASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 AC107918.4-202ENST00000641623 219 ntBASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SMARCD1Q96GM5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 AC093909.1-201ENST00000504731 1122 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 AC079776.4-201ENST00000511039 504 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 MIR7706-201ENST00000613747 67 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms