Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 AL355877.3-201ENST00000622820 899 ntBASIC22.57■■□□□ 1.2
ZNF428Q96B54 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF428Q96B54 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ZNF428Q96B54 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 FZD10-202ENST00000539839 3282 ntBASIC22.56■■□□□ 1.2
ZNF428Q96B54 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 KRT18P67-201ENST00000432816 1264 ntBASIC22.56■■□□□ 1.2
ZNF428Q96B54 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.56■■□□□ 1.2
ZNF428Q96B54 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ZNF428Q96B54 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 AC016396.2-201ENST00000562575 1417 ntBASIC22.56■■□□□ 1.2
ZNF428Q96B54 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF428Q96B54 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AC003669.1-201ENST00000334569 611 ntBASIC22.55■■□□□ 1.2
ZNF428Q96B54 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 RPS2P1-201ENST00000434010 821 ntBASIC22.55■■□□□ 1.2
ZNF428Q96B54 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.55■■□□□ 1.2
ZNF428Q96B54 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ZNF428Q96B54 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF428Q96B54 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ABCD1P5-201ENST00000445663 754 ntBASIC22.54■■□□□ 1.2
ZNF428Q96B54 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 AC021087.4-201ENST00000563761 564 ntBASIC22.54■■□□□ 1.2
ZNF428Q96B54 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF428Q96B54 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF428Q96B54 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 AC132938.5-201ENST00000624980 1813 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms