Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
SMARCC1Q92922 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.32■■□□□ 1.16
SMARCC1Q92922 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC1Q92922 AC129492.6-201ENST00000611383 1305 ntBASIC22.31■■□□□ 1.16
SMARCC1Q92922 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 AL671277.1-201ENST00000429656 993 ntBASIC22.31■■□□□ 1.16
SMARCC1Q92922 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 AC069262.1-201ENST00000539058 672 ntBASIC22.31■■□□□ 1.16
SMARCC1Q92922 AC190387.1-201ENST00000551683 408 ntBASIC22.31■■□□□ 1.16
SMARCC1Q92922 AL390955.2-201ENST00000603032 514 ntBASIC22.31■■□□□ 1.16
SMARCC1Q92922 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SMARCC1Q92922 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC1Q92922 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 PMS2P4-201ENST00000412466 1052 ntBASIC22.3■■□□□ 1.16
SMARCC1Q92922 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 Z92544.3-201ENST00000624747 417 ntBASIC22.3■■□□□ 1.16
SMARCC1Q92922 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SMARCC1Q92922 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC1Q92922 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 AC005237.2-201ENST00000434368 219 ntBASIC22.29■■□□□ 1.16
SMARCC1Q92922 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 CROCCP3-202ENST00000420820 1947 ntBASIC22.29■■□□□ 1.16
SMARCC1Q92922 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.29■■□□□ 1.16
SMARCC1Q92922 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC1Q92922 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 AC140658.5-201ENST00000438532 169 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 SPDYE11-202ENST00000450699 704 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 DUX4L27-201ENST00000554796 1261 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 SPDYE9P-201ENST00000570642 692 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 AC099522.2-201ENST00000607001 744 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 SPDYE10P-202ENST00000612005 668 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 SPDYE8P-202ENST00000612377 668 ntBASIC22.28■■□□□ 1.16
SMARCC1Q92922 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms