Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 RASA4DP-201ENST00000460726 1199 ntBASIC13.9□□□□□ -0.18
NPIPB3Q92617 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NPIPB3Q92617 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB3Q92617 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPB3Q92617 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPB3Q92617 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.19
NPIPB3Q92617 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 AL391807.1-203ENST00000604392 2365 ntBASIC13.89□□□□□ -0.19
NPIPB3Q92617 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 AL136038.4-201ENST00000603606 1261 ntBASIC13.89□□□□□ -0.19
NPIPB3Q92617 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 AL023973.1-201ENST00000624619 620 ntBASIC13.89□□□□□ -0.19
NPIPB3Q92617 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPB3Q92617 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB3Q92617 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB3Q92617 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB3Q92617 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB3Q92617 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 AC124067.4-201ENST00000519691 2379 ntBASIC13.88□□□□□ -0.19
NPIPB3Q92617 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPB3Q92617 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB3Q92617 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB3Q92617 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms