Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.58■□□□□ 0.89
SMARCC2Q8TAQ2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCC2Q8TAQ2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 COX5BP2-201ENST00000392354 334 ntBASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCC2Q8TAQ2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 TSPY19P-201ENST00000418461 509 ntBASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 TSPY18P-201ENST00000441642 509 ntBASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AC091304.2-201ENST00000564639 760 ntBASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AL732292.2-201ENST00000609649 430 ntBASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AL691432.3-201ENST00000621860 400 ntBASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCC2Q8TAQ2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 NUS1P2-201ENST00000417358 873 ntBASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 AC111152.3-201ENST00000569699 673 ntBASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 AC005336.2-201ENST00000593183 939 ntBASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms