Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST4Q8NFU0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.23■□□□□ 0.03
BEST4Q8NFU0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 LINC01126-201ENST00000623515 1646 ntBASIC15.23■□□□□ 0.03
BEST4Q8NFU0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BEST4Q8NFU0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 MESTP1-201ENST00000404287 994 ntBASIC15.22■□□□□ 0.03
BEST4Q8NFU0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 RARRES2P10-201ENST00000564312 460 ntBASIC15.22■□□□□ 0.03
BEST4Q8NFU0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 AC073648.6-201ENST00000641589 218 ntBASIC15.22■□□□□ 0.03
BEST4Q8NFU0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 HOXB1-202ENST00000577092 1414 ntBASIC15.22■□□□□ 0.03
BEST4Q8NFU0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST4Q8NFU0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 AC060834.1-201ENST00000443027 2032 ntBASIC15.21■□□□□ 0.03
BEST4Q8NFU0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST4Q8NFU0 MIR935-201ENST00000401179 91 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms