Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 TSPY22P-201ENST00000427496 604 ntBASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 AC090616.6-201ENST00000582640 721 ntBASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 AC011498.5-201ENST00000592027 486 ntBASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
LSMEM1Q8N8F7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC016396.2-201ENST00000562575 1417 ntBASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC002558.1-201ENST00000488906 803 ntBASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC010460.3-201ENST00000511359 1579 ntBASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSMEM1Q8N8F7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 LYSMD4-203ENST00000378904 2122 ntBASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms