Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 AC091304.2-201ENST00000564639 760 ntBASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 RNF165-205ENST00000588679 2904 ntBASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 AC012317.2-201ENST00000623305 2251 ntBASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB42Q8N4Z0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 INTS4P1-201ENST00000438455 1935 ntBASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB42Q8N4Z0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 MIR5100-201ENST00000579544 119 ntBASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 AC134043.2-201ENST00000624206 2238 ntBASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB42Q8N4Z0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AC005104.2-201ENST00000427818 678 ntBASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB42Q8N4Z0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms